[Frontiers in Bioscience E2, 22-35, January 1, 2010]

Transcriptional regulation of the presenilin-1 gene controls gamma-secretase activity

Sebum Lee1, Hriday K. Das1,2

1Department of Pharmacology and Neuroscience, University of North Texas Health Science Center at Fort Worth, 3500 Camp Bowie Boulevard, Fort Worth, Texas 76107, 2Department of Molecular Biology and Immunology, and Institute of Cancer Research, University of North Texas Health Science Center at Fort Worth, 3500 Camp Bowie Boulevard, Fort Worth, Texas 76107

TABLE OF CONTENTS

1. Abstract
2. Introduction
3. Materials and Methods
3.1. Cell culture
3.2. Western blot analysis
3.3. RT-PCR analysis
3.4. Transfection of APP, p53, ZNF237, CHD3, and Ets2 expression vectors
3.5. Abeta 1-40 Enzyme-Linked Immunosorbent Assay (ELISA)
3.6. Chromatin immunoprecipitation (ChIP) assay
3.7. Statistical Analysis
4. Results
4.1. JNK inhibitor SP600125 and JNK1 siRNA decrease the Abeta40 level in human neuroblastoma SK-N-SH cells
4.2. p53 inhibits PS1 transcription by deacetylation of histone at the PS1 promoter and, decreases PS1 protein and the Abeta40 levels in human neuroblastoma SK-N-SH cells
4.3. ZNF237 and CHD3 decrease PS1 protein and Abeta40 levels in human neuroblastoma SH-SY5Y cells by suppressing PS1 transcription via deacetylation of histone at the PS1 promoter
4.4. Ets2 transcription factor enhances PS1 protein and Abeta40 levels in human neuroblastoma SK-N-SH cells by activation of PS1 transcription via increased acetylation of histone at the PS1 promoter
4.5. JNK inhibitor SP600125 and Ets2 transcription factor do not alter the expression of another PS1/gamma-secretase component nicastrin (NCT)
4.6. HDAC inhibitor trichostatin-A (TSA) inceases histone acetylation and augments PS1 expression in SK-N-SH cells
5. Discussion
6. Acknowledgement
7. References

1. ABSTRACT

Inhibition of basal JNK activity by JNK inhibitor SP600125 or JNK1siRNA repressed presenilin-1 (PS1) expression in SK-N-SH cells by augmenting the level of p53, a repressor of the PS1 gene (1). We now showed that repression of PS1 transcription by JNK inhibitor SP600125 inhibited gamma-secretase mediated processing of amyloid precursor protein (APP) resulting in the accumulation of C99 fragment and the reduction of secreted Abeta40 level without altering the expression of nicastrin (NCT). Co-treatment of cells with SP600125 and p53 inhibitor, pifithrin-alpha, partially nullified the suppressive effects of SP610025 on PS1 expression and secreted Abeta40 level. Suppression of JNK1 by JNK1siRNA also decreased Abeta40 level. Furthermore, overexpression of the repressors p53, ZNF237 and CHD3 of the PS1 gene also suppressed the processing of APP through repression of PS1 transcription by deacetylation of histone at the PS1 promoter. Transcriptional activator Ets2 increased PS1 protein and secreted Abeta40 levels without affecting the expression of NCT by activating PS1 transcription via hyper-acetylation of histone at the PS1 promoter. Therefore, regulation of PS1 transcription modulates gamma-secretase activity.

2. INTRODUCTION

Alzheimer's disease (AD) is the most common form of dementia with progressive impairment in cognitive functions. Declined cognitive functions are due to the loss of neurons in the brain (2). The majority of AD cases are late onset sporadic form of AD and about 5% of AD is accounted for the inherited form of AD (3) which is caused by the mutations in the coding regions of amyloid precursor protein (APP) (4) or presenilins (5, 6). The underlying mechanisms of neuronal losses seen in sporadic AD and inherited familial AD (FAD) are not clear. However, deposition of amyloid plaques generated by amyloid beta (Abeta1-40, Abeta1-42) peptides is the common feature found in both types of AD. Amyloid plaques are believed to initiate and/or aggravate the loss of neurons in both cases (7, 8). Presenilin 1 (PS1) is a critical component of gamma-secretase (9) which is responsible for the generation of Abeta peptides (10). Amyloid precursor protein (APP) bears Abeta domain. To release Abeta domain, APP has to be processed by beta-secretase beforehand (10) and then the remaining C-terminal APP stub called C99 is processed by gamma-secretase. Gamma-secretase mediated cleavage of C99 causes a release of Abeta domain into the extracellular space (11). Later, Abeta peptides are transformed from diffusible Abeta into aggregated Abeta fibrils on a sigmoid scale (12). In an attempt to reduce Abeta burden, gamma-secretase inhibitors are now being tested in human trials (13). Since, PS1 appears to be responsible for the aspartyl protease activity of gamma-secretase, another approach to reduce Abeta plaque burdens would be to reduce PS1 protein level by repressing PS1 transcription. In the latter case, upstream regulators of the PS1 gene transcription could be potential targets. Therefore, we have studied the regulation of transcription of the human PS1 gene. We have shown that Ets1/2 transcription factors upregulate PS1 transcription (14-17), whereas transcription factors p53, ZNF237, and CHD3 downregulate PS1 transcription (15, 18, 19). We have recently shown that inhibition of basal JNK activity by JNK inhibitor SP600125 represses PS1 transcription by a p53 dependent mechanism and also reduces PS1 protein level (1). Furthermore, the role of JNK on the regulation of PS1 expression was confirmed by JNK1 siRNA. In this report, we show that transcriptional regulation of the PS1 gene can modulate the PS1/gamma-secretase activity without altering the expression of other components (such as nicastrin) of the gamma-secretase enzyme.

3. MATERIALS AND METHODS

3.1. Cell culture

Human neuroblastoma SK-N-SH cell line was maintained in Dulbecco's modified Eagle medium (DMEM) containing 10% fetal bovine serum, 1% penicillin/streptomycin (Gibco, CA). The culture medium for SH-SY5Y cell line was the same except the addition of 1% glutamate (Gibco, CA). JNK inhibitor SP600125 and HDAC inhibitor trichostatin-A (TSA) were purchased from (Calbiochem, CA) and p53 inhibitor pifithrin-alpha (PFT-alpha) was from (Biomol international, PA).

3.2. Western blot analysis

Cells were treated with DMSO or 20uM SP600125 in DMSO as described before (1). Cells were also treated with DMSO or 7.5ug/ml or 15ug/ml of trichostatin-A (TSA) in DMSO as described previously (20). Protein expression levels were measured by Western blot analysis as mentioned previously. Briefly, cells were lysed with 1% protein lysis buffer (150mM NaCl, 25mM Tris-HCl pH 7.8, 1% NP-40, 10mM NaF, 1mM Na3VO4) and 50ug of total proteins were separated in 16% or 10% SDS PAGE. The blots were transferred to the PVDF membranes and then blocked with 5% BSA in 0.05% TBST for an hour. The membranes were incubated with primary antibodies against p53 and Ets2 (Santa Cruz biotechnology, CA), PS1 (Chemicon, CA), NCT (Abcam Inc., MA), Ac-H3 (Millipore, MA), Flag, APP, and actin (Sigma. MO) for overnight at 4° C. The blots were visualized using ECL detection system (Pierce, IL).

3.3. RT-PCR analysis

Total RNA was prepared using trizol reagent (Invitrogen, CA). cDNA was synthesized from 2ug RNA with random primers by AMV reverse transcriptase (Promega, CA). cDNA samples were amplified with primers for PS1 (Forward: 5'- GGA GCC TGC AAG TGA CAA CAG C-3' and Reverse: 5'- GTC ACA GGG ACA AAG AGC ATG ATCA-3;) and GAPDH (Forward: 5'-AGG TCG GAG TCA ACG GAT TTG GTC G-3' and Reverse: 5'- GCA GAG ATG ATG ACC CTT TTG-3') respectively using GoTaq Green Master Mix (Promega, CA). Expected product sizes are 382 bps for PS1 and 350 bps for GAPDH.

3.4. Transfection of APP, p53, ZNF237, CHD3, and Ets2 expression vectors

Constructions of pC1.Ets2, pCMV.p53, pCMV-Tag2-ZNF237, pCMV-Tag2-CHD3 were reported previously (15, 16, 18, 19). pcDNA3-APP751 was a kind gift from Dr. Rudolph Tanzi. SK-N-SH cells or SH-SY5Y cells were transfected with 10ug of the each control vector or expression construct using lipofectamine 2000 reagent (Invitrogen, CA) according to manufacturers' guide.

3.5. Abeta1-40 Enzyme-Linked Immunosorbent Assay (ELISA)

Cells were grown to ~80% confluence in 60mm dishes. After the culture media were replaced with 1.5mL fresh culture media, the cells were further cultured. 24 to 36 hours later, the culture media were collected. Human Abeta1-40 was detected in the collected culture medium by ELISA using human beta-amyloid (1-40) kit (Biosource, KHB341). Briefly, 100uL medium placed in each well of a 96 well plate (Biosource, KHB341) coated with monoclonal antibody specific for the human Abeta NH2-terminus (Biosource, KHB341) was incubated for 24 hours at 4° C. Then the antibody specific for the human COOH-terminus of Abeta (Biosource, KHB341) was added and the samples were further incubated at 4° C for 24 hours with agitation. After removal of samples by extensive washings, the bound Abeta antibodies were detected by HRP labeled secondary antibody. Secondary antibodies were detected by stabilized chromogen substrate. The absorbance at 450nm was measured using a plate reader. The concentrations of the Abeta samples were compared with the results from the standard Abeta. Abeta samples were detected at concentrations from 3 to 6 pg/mL.

3.6. Chromatin immunoprecipitation (ChIP) assay

Chromatin immunoprecipitation assay was performed as previously described (19). Briefly, the cells were fixed with 1% formaldehyde for 10 minutes. Fixing reaction was ended with 0.125M glycine. The fixed cells were lysed and sonicated in ChIP sonication buffer (1% Triton X-100, 0.1% Deoxycholate, 50mM Tris pH 8.1, 150mM NaCl, 5mM EDTA, 10ul/mL proteinase inhibitor cocktail) and 1mM phenylmethylsulfonyl fluoride (Sigma, MO). The whole cell lysates were then diluted in ChIP dilution buffer (0.01% SDS, 1% Triton X-100, 1.2mM EDTA, 16.7mM Tris-HCl pH 8.1, 167mM NaCl) and incubated with 2ug of anti Ac-H3 antibody (Millipore, MA) overnight at 4° C with agitation. The immune complex were then precipitated with 30uL protein agarose A/G and washed serially with low salt wash buffer (20mM Tris pH 8.0, 1% triton X-100, 2mM EDTA, 180mM NaCl), high salt wash buffer (20 mM Tris pH 8.0, 1% triton X-100, 2 mM EDTA, 500 mM NaCl), LiCl wash buffer (20mM Tris pH 8.0, 0.1% NP40, 2mM EDTA, and 250mM LiCl), 1X TE (10mM Tris pH 8.0 and 1mM EDTA). The protein-DNA complex was eluted twice with Elution buffer (1% SDS, 0.1 M NaHCO3). Crosslinking was reversed in the presence of 200mM NaCl at 67° C overnight. Protein was removed with 0.2mg/mL proteinase K. DNA was then purified by phenol extraction method and analyzed by PCR with PS1 primers (Forward primer: 5'-CGACGCCAGAGCCGGAAATGAC-3'; Reverse primer: 5'-TTCCGATGTGAAACCGCGGACC-3') to detect PS1 promoter sequence from +25 to -66. 27 cycles of PCR were performed.

3.7. Statistical Analysis

Prism software (Graphpad software Inc.) was used for analyzing all the data. Comparison was made between groups by one-way ANOVA and students-Newman-Keuls (SNK) test. Probability (P value) was considered to be significant with less than 0.05.

4. RESULTS

4.1. JNK inhibitor SP600125 and JNK1 siRNA decrease the Abeta40 level in human neuroblastoma SK-N-SH cells

In the previous report, we showed that inhibition of basal JNK activity by JNK specific inhibitor SP600125 or JNK1 siRNA in SK-N-SH cells represses p53-mediated PS1 suppression (1). We now show that JNK inhibitor SP600125 augments p53 protein level without enhancing the transcription of the p53 gene (Figures 1A -1D). SK-N-SH cells were treated with DMSO or 20uM SP600125 in DMSO for 24 hr. Total cellular protein and RNA were prepared for Western blot and RT-PCR analysis. Treatment of cells with SP600125 increased p53 protein level substantially (Figures 1A and 1B). On the other hand, treatment of cells with SP600125 has no detectable effect on p53mRNA level (Figures 1C and 1D). Therefore, SP600125 appears to augment the level of p53 protein and thus decreases PS1 transcription without enhancing transcription of p53. Furthermore, suppression of PS1 by SP600125 was antagonized by co-treatment with a p53 inhibitor, pifithrin-alpha (PFT-alpha) (1). p53 inhibitor PFT-alpha appears to modulate the nuclear import or export or both or decrease the stability of nuclear p53 (21). Knowing the suppressive effect of SP600125 and the SP600125 antagonizing effect of PFT-alpha on PS1 expression, we began to test if the changes in PS1 expression by SP600125 and PFT-alpha are correlated with the PS1/gamma-secretase activity. SK-N-SH cells were pretreated with DMSO or PFT-alpha for 2 hours before SP600125 treatment. The cells were then cultured in the presence of PFT-a and SP600125. 24 hours later, the Abeta40 levels were measured by sandwich-ELISA and PS1 protein expression levels were determined by the Western blotting. As we reported previously (1), SP600125 reduced the PS1 protein level which was partially restored by PFT-alpha (Figure 1E). Consistent with the PS1 Western blot result, Abeta40 level was decreased by ~50% with SP600125 treatment (Figure 1F). Co-treatment with PFT-alpha partially restored Abeta40 level (Figure 1F). To further confirm that the PS1/gamma-secretase activity is inhibited by JNK inhibitor, SP600125, SK-N-SH cells were transiently transfected with APP expressing vector to detect C99 which is a substrate of the PS1/gamma-secretase. The level of C99 was substantially increased when APP-transfected cells were treated with SP600125 (Figures 1G and 1H). Co-treatment of cells with SP600125 and PFT-alpha restored C99 to the level observed in cells transfected with the APP expression vector (Figures 1G and 1H). The Western blotting data of C99 appears to be consistent with the sandwich-ELISA data of Abeta40.

We have previously reported that transient transfection of JNK1-siRNA decreased JNK1 expression by ~40%, increased p53 protein level by ~40%, and suppressed PS1 protein expression by ~40% (1). Therefore, we tested if transfection of JNK1siRNA would decrease Abeta40 secretion in SK-N-SH cells. Transient transfection of JNK1-siRNA into SK-N-SH cells decreased JNK1 expression (Figure 2A) (1) and reduced secreted Abeta40 by ~30% relative to control siRNA transfected cells (Figure 2B). Therefore, the data with SP600125 and JNK1 siRNA suggest that the PS1/gamma-secretase activity can be downregulated by inhibiting basal JNK activity.

4.2. p53 inhibits PS1 transcription by deacetylation of histone at the PS1 promoter and, decreases PS1 protein and the Abeta40 levels in human neuroblastoma SK-N-SH cells

We have shown previously that p53 inhibits the PS1-CAT reporter gene expression without binding to the PS1 promoter (1). Transcription factors Ets1/Ets2 bind to the -10 Ets site of the PS1 promoter and activate PS1 transcription (15). We recently showed that increased expression of p53 enhanced p53-Ets1/Ets2 interaction leading to the removal of Ets1/Ets2 from the -10 Ets site of the PS1 promoter and the subsequent repression of PS1 transcription (1). The acetylation of lysine residues on histone tails by histone acetyl transferase (HATs) facilitates transcription of the gene by transcriptional activator (22, 23). On the contrary, deacetylation of these lysine residues by histone deacetylase (HDACs) suppresses gene transcription by transcriptional repressor (24). To determine whether p53 overexpression in SK-N-SH cells also reduces PS1 protein level and thus PS1/gamma-secretase activity by inhibiting PS1 transcription by decreasing acetylation of histone at the PS1 promoter, cells were transiently transfected with empty pCMV vector or pCMV-p53 expressing vector for 48 hours. We tested by ChIP assay whether removal of Ets1/2 by p53-Ets1/2 interactions resulted in the decrease of histone acetylation at the PS1 promoter area around the main transcription initiation site (+1). Transfected cells were cross-linked and DNA-protein complexes were immuno-precipitated with anti-acetyl-H3. The DNA in the complexes was then analyzed by PCR for the presence of the PS1 promoter (Figure 3A). Transient transfection of pCMV-p53 decreased acetylation of histone H3 in the PS1 promoter (-25/+66) (Figures 3A and 3B). Total cellular mRNA and protein were extracted from the transfected cells for RT-PCR and Western blot analysis. To test if p53 represses PS1 expression at the level of transcription, we performed RT-PCR (Figure 3C). The RT-PCR results showed that p53 represses PS1mRNA expression by ~70% (Figures 3C and 3D). Therefore, this data and our previous study (1) suggest that transcriptional repression of PS1 by p53 is mediated by chromatin remodeling via deacetylation of histone due to decreased binding of Ets 1/ 2 transcription factors to the PS1 promoter. Transient transfection of pCMV-p53 also increased p53 protein level substantially and decreased PS1 protein level by ~50% (Figures 3E and 3F).

Next, we asked if the reduction of PS1 protein expression causes the downregulation of the PS1/gamma-secretase activity. To measure the PS1/gamma-secretase activity, we measured Abeta40 levels in conditioned medium of the pCMV or pCMV-p53 transfected cells by sandwich ELISA method. Abeta40 level was significantly decreased in cells transfected with pCMV-p53 (Figure 3G). Therefore, this data supports the hypothesis that suppression of PS1 expression level reduces PS1/gamma-secretase activity.

4.3. ZNF237 and CHD3 decrease PS1 protein and Abeta40 levels in human neuroblastoma SH-SY5Y cells by suppressing PS1 transcription via deacetylation of histone at the PS1 promoter

We used neuroblastoma SH-SY5Y cell line in these experiments instead of SK-N-SH cell line, because SH-SY5Y cell line does not express ZNF237 whereas SK-N-SH cell line does (18). In previous report, we showed that ZNF237 and CHD3 interacted with the Ets transcription factor ERM, an activator of the PS1 gene, to decrease PS1 promoter activity in human neuroblastoma SH-SY5Y cells (18, 19) suggesting that ZNF237 and CHD3 are the repressors of the PS1 gene. We dissected the mechanism by which ZNF237 and CHD3 inhibit PS1

transcription by deacetylation of histone at the PS1 promoter. We tested if acetylation of histone at the PS1 promoter, PS1 mRNA, and protein levels are suppressed by the transfection of ZNF237 and CHD3 genes into SH-SY5Y cells. SH-SY5Y cells were transiently transfected with empty pCMV-Tag2 vector or pCMV-Tag2-ZNF237 or pCMV-Tag2-CHD3 for 2 days. Transient transfection with pCMV-Tag2-ZNF237 and pCMV-Tag2-CHD3 decreased acetylation of histone at the PS1 promoter as detected by ChIP assay (Figures 4A and 4B). Transient transfection with pCMV-Tag2-ZNF237 and pCMV-Tag2-CHD3 also decreased PS1mRNA levels by ~50% and ~60% respectively (Figures 4C and 4D). Transient transfection with pCMV-Tag2-ZNF237 and pCMV-Tag2-CHD3 also increased the expression of Tag-ZNF237 and Tag-CHD3 proteins (Figure 4E, lanes 2 and 3), and decreased PS1 protein level by ~30% and ~60% (Figures 4E and 4F) respectively in SH-SY5Y cells. Furthermore, the Abeta40 levels in conditioned media of the cells transiently transfected with pCMV-Tag2-ZNF237 and pCMV-Tag2-CHD3 were reduced by ~25% and ~40% respectively compared to vector transfected cells (Figure 4G). Therefore, these data suggest that the repressive effects of ZNF237 and CHD3 on PS1 protein expression are directly correlated with the decrease of PS1/gamma-secretase activity.

4.4. Ets2 transcription factor enhances PS1 protein and Abeta40 levels in human neuroblastoma SK-N-SH cells by activation of PS1 transcription via increased acetylation of histone at the PS1 promoter

We reported previously that Ets2 transcription factor recognizes -10 Ets motif on the PS1 promoter and increases PS1 promoter activity by CAT-reporter assay in human neuroblastoma SK-N-SH cells (15). In this study we asked whether the increased PS1 promoter activity by Ets2 is translated into the increased acetylation of histone at the PS1 promoter as well as increased expressions of PS1 mRNA and protein levels. We performed ChIP assay, RT-PCR, and Western blotting to evaluate the effect of Ets2 on histone acetylation at the PS1 promoter, and the PS1 mRNA and protein expression in SK-N-SH cells transfected with empty pC1 vector or pC1.Ets2 expression vectors. Transient transfection with pC1.Ets2 increased acetylation of histone at the PS1 promoter (Figures 5A and 5B). Transient transfection with pC1.Ets2 increased PS1 mRNA level (Figures 5C and 5D) by ~2 fold and PS1 protein level by ~2 fold (Figures 5E and 5F). Therefore, these data show that transcriptional activation of the PS1 gene by Ets2 increases PS1 protein level. To determine if the increased PS1 expression is associated with the enhanced PS1/gamma-secretase activity, we also measured Abeta40 peptides from the culture media of pC1 or pC1.Ets2 expressing SK-N-SH cells. Our Abeta1-40 ELISA data showed that secreted Abeta40 level was increased by ~2 fold in pC1.Ets2 transfected cells relative to pC1 transfected cells (Figure 5G). This data suggests that the upregulation of PS1 gene expression by Ets2 transcription factor increases the PS1/gamma-secretase activity. It is also to be noted that detection of Abeta1-40 in our experiments was carried out without overexpressing APP or C99. This allows us to get more physiological values of secreted Abeta1-40.

4.5. JNK inhibitor SP600125 and Ets2 transcription factor do not alter the expression of another PS1/gamma-secretase component nicastrin (NCT)

The gamma-secretase is an equimolecular complex of four noncovalently associated integral membrane proteins, PS1, nicastrin (NCT), Aph-1, and Pen-2 (9). PS1 acts as the catalytic subunit of the gamma-secretase enzyme (10). We have shown that suppression of PS1 transcription by JNK inhibitor SP600125 or p53 or ZNF237 or CHD3 reduces PS1 protein expression and gamma-secretase enzyme activity. On the contrary, activation of PS1 transcription by Ets2 enhances PS1 protein expression and gamma-secretase enzyme activity. In order to determine whether regulation of PS1 expression also controls the expression of any other components (NCT, Aph-1, and Pen-2) of the gamma-secretase enzyme, we treated SK-N-SH cells with or without JNK inhibitor. As shown in Figure 6A, treatment of SK-N-SH cells with 20uM SP600125 decreased PS1 expression (Figure 1E) but did not have any detectable effect on the expression of both mature (120 kDa) and immature (110 kDa) forms of NCT. Similarly, transient transfection of SK-N-SH cells with pC1.Ets2 increased Ets2 and PS1 expression (Figure 5E) but did not alter the expression of NCT (Figure 6B). These results appear to suggest that regulation of PS1 expression has no effect on the expression of other components of the PS1/gamma-secretase enzyme.

4. 6. HDAC inhibitor trichostatin-A (TSA) increases histone acetylation and augments PS1 expression in SK-N-SH cells

We showed before that inhibition of PS1 expression by SP600125, p53, ZNF237, and CHD3 is mediated by deacetylation of histone at the PS1 promoter. On the contrary, activation of PS1 expression by Ets2 is mediated by hyper-acetylation of histone at the PS1 promoter. Deacetylation of histone is mediated by histone deacetylase (HDACs). Therefore, HDAC inhibitor would prevent deacetylation of histone and increase acetylation of histone to activate PS1 expression. We now showed that HDAC inhibitor TSA augmented PS1 protein level and also increased acetylation of histone. SK-N-SH cells were treated with 7.5ug/ml or 15ug/ml of TSA in DMSO for 24 hr . Total cellular protein was prepared for Western blot analysis. We could not detect acetylation of H3 but detect PS1 protein expression in cellular extract prepared from DMSO treated cells (Figure 7A, lane 1). On the contrary, treatment of cells with TSA increased acetylation of histone H3 and also PS1 protein level substantially (Figure 7). These results suggest that although the amount of Ac-H3 in the chromatin in very low in the normal cells, the level of Ac-H3 at the PS1 promoter is high enough (Figure 4A, lane 1) to mediate PS1 transcription. Inhibition of HDACs by TSA augments the amount of Ac-H3 both in the chromatin and in the PS1 promoter resulting in the activation of PS1 expression. These data also confirm the hypothesis that modulation of the acetylation of histone controls PS1 expression.

5. DISCUSSION

The data presented here indicate that the transcriptional regulation of PS1 expression is mediated by acetylation and deacetylation of histone at the PS1 promoter. Our data also suggest that regulation of PS1 transcription controls PS1/gamma-secretase activity as shown by measuring the level of secreted Abeta40 peptide, a major Abeta species of the PS1/gamma-secretase mediated metabolism of APP, in conditioned medium of neuroblastoma cells. Various PS1 mutations and PS1 deficiency are known to alter the PS1/gamma-secretase activity and thus the production of Abeta peptides (25-32). In addition, PS1 contains two aspartate residues responsible for the aspartyl protease activity of gamma-secretase (33, 10).

To gain insight into how transcriptional regulation of the PS1 gene may potentially control PS1/gamma-secretase activity, we have previously identified several transcription factors that regulate PS1 transcription (14-19). Several Ets factors that recognize specifically the -10 Ets motif of the PS1 promoter have been identified by yeast one-hybrid selection (16, 17). Ets transcription factors Ets2 and ERM specifically bind to the -10 Ets element and transactivate PS1 transcription in transient transfection assay (16, 17). Using the C-terminal 415 amino acid of ERM as bait for yeast two hybrid selection in a human brain cDNA library two proteins were identified, which interact with Ets transcription factor ERM (18, 19). One ERM-interacting protein was a zinc finger protein ZNF237 (18) and the other protein was a chromatin remodeling factor CHD3/ZFH (19). ZNF237 is a member of the myeloproliferative and mental retardation motif (MYM) gene family (34). ZNF237 is widely expressed in different tissues in eukaryotes under several forms derived by alternative splicing, including a large 382 amino acid form containing a single MYM domain, and 2 shorter forms of 208 and 213 amino acids respectively that do not contain MYM domain (34). Both the 382 as well as the 208 amino acid forms have been shown to repress PS1 transcription in neuroblastoma cells (18). The C-terminal fragment (amino acids 1676 -2000) of CHD3, a component of the histone deacetylase (HDACs) complex (35), has been shown to interact with ERM and repress the transcription of the PS1 gene (19). Transfection of SH-SY5Y cells with CHD3 expression vector inhibited PS1 transcription and PS1 protein expression as well as increased recruitment of CHD3 into the PS1 promoter (19). Conversely, treatment of cells with HDAC inhibitor TSA enhanced acetylation of histone and augmented PS1 expression (Figure 7). These data suggest that chromatin remodeling and deacetylation of histones by CHD3-containing HDAC may play a crucial role in the repression of PS1 transcription.

In this report, we extend our previous studies to correlate the transcriptional regulation of the PS1 gene with the PS1/gamma-secretase activity. We now show that activation of PS1 transcription by Ets2 increased PS1 protein and secreted Abeta40 levels by augmenting acetylation of histone at the PS1 promoter. On the contrary, repression of PS1 transcription by p53, ZNF237 and CHD3 reduced PS1 protein and secreted Abeta40 levels by decreasing acetylation of histone at the PS1 promoter. Therefore, our studies document that regulation of PS1 transcription leads to the changes in PS1/gamma-secretase activity (Figure 8). Our studies also demonstrate that it is potentially possible to reduce APP-processing and production of Abeta peptide by inhibiting histone acetyl transferase (HATs) activity or augmenting histone deacetylase (HDACs) activity.

JNK inhibitor SP600125 was shown to suppress PS1 expression by upregulating p53 (1). We have previously reported that JNK inhibitor SP600125 enhances p53-Ets1/2 interaction and thus interferes with the DNA binding of Ets1/2 onto the PS1 promoter (1) leading to the repression of PS1 transcription and PS1 protein level. In this report, we tested the effects of JNK inhibitor and p53 inhibitor on the PS1/gamma-secretase activity. Treatment of cells with SP600125 decreased secreted Abeta40 level which is partially recovered by a p53 inhibitor, PFT-alpha. We also verified ELISA data by measuring the protein level of C99, a substrate of PS1/gamma-secretase proteolysis. Furthermore, the role of JNK on the regulation of the PS1/gamma-secretase activity was confirmed by JNK1 siRNA. Since, JNK inhibitor and JNK1 siRNA represses PS1 expression through increasing p53 protein level (1), we tested the direct role of p53 on the PS1/gamma-secretase activity. The transient transfection of p53 also decreased PS1 transcription, PS1 protein level, and secreted Abeta40 in neuroblastoma cells. Therefore, we have demonstrated that inhibition of JNK pathway represses PS1 transcription and the PS1/gamma-secretase activity via upregulation of p53 protein expression. In conclusion, our studies point to a potential new approach to use JNK-siRNA or JNK inhibitor SP600125 or activator of HDACs, and inhibitor of HATs to target PS1 transcription for therapy to prevent or treat Alzheimer's disease.

Mutations of the PS1 gene (FADPS1) that cause familial AD also increase p53 activity by augmenting p53 transcription (36). Enhanced PS1/gamma-secretase activity by FADPS1 generates higher level of AICD by proteolytic processing of APP, which subsequently activates p53 transcription and p53 protein level triggering p53-mediated apoptosis in FAD brains (36). On the contrary our results (1) suggest that increased p53 level downregulates PS1 expression and PS1/gamma-secretase activity suggesting a feed back mechanism of transcriptional regulation of PS1 and p53 genes. Therefore, inhibition of FADPS1 transcription by SP600125 in FAD brains would not only inhibit the production of amyloidogenic Abeta40//42 peptide to reduce p53-independent apoptosis but also decrease the amount of AICD resulting in the inhibition of p53 transcription and p53 protein level to reduce p53-dependent apoptosis. Therefore, JNK inhibitor SP600125 may have potential therapeutic value to treat both sporadic and familial forms of Alzheimer's disease by reducing both p53-independent and p53-dependent apoptosis of neurons.

6. ACKNOWLEDGMENT

This research was supported by a grant from the National Institutes of Health (R01AG18452-04). We wish to thank Dr. Bert Vogelstein (Johns Hopkins University Medical School) for providing us with p53 expression vector, and also Drs. Rudolf Tanzi and Giuseppina Tesco (Mass General Hospital, Boston) for pcDNA3-APP751 construct.

7. REFERENCES

1. Lee S, H. K. Das: Inhibition of basal activity of c-jun-NH2-terminal kinase (JNK) represses the expression of presenilin-1 by a p53-dependent mechanism. Brain Res 1207, 19-31 (2008)
doi:10.1016/j.brainres.2008.02.016
PMid:18374905

2. Whitehouse P. J, D. L. Price, R. G. Struble, A. W. Clark, J. T. Coyle, M. R. Delon: Alzheimer's disease and senile dementia: loss of neurons in the basal forebrain. Science 215, 1237-1239 (1982)
doi:10.1126/science.7058341
PMid:7058341

3. Turner R. S: Alzheimer's disease. Semin Neurol 26, 499-506 (2006)
doi:10.1055/s-2006-951622
PMid:17048151

4. Goate A, M. C. Chartier-Harlin, M. Mullan, J. Brown, F. Crawford, F, L. Fidani, L. Giuffra, A. Haynes, N. Irving, L. James, R. Mant, P. Newton, K. Rooke, P. Roques, C. Talbot, M. Pericak-Vance, A. Roses, R. Williamson, M. Rossor, M. Owen, J. Hardy: Segregation of a missense mutation in the amyloid precursor protein gene with familial Alzheimer's disease. Nature 349, 704-706 (1991)
doi:10.1038/349704a0
PMid:1671712

5. Sherrington R, E. I. Rogaev, Y. Liang, E. A. Rogaeva, G. Levesque, M. Ikeda, H. Chi, C. Lin, G. Li, K. Holman, T. Tsuda, L. Mar, J.-F., Foncin, A. C. Bruni, M. P. Montesi, S. Sorbi, I. Rainero,L. Pinessi, L. Nee, I. Chumakov, D. Pollen, A. Brooks, P. Sanseau, R. J. Polinsky, W. Wasco, H. A. R. Da Silva, J. L. Hanes, M. A. Pericak-Vance, R. E. Tanzi, A. D. Roses, P. E., Fraser, J. M. Rommens, P. H. St George-Hyslop: Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease. Nature 375, 754-760 (1995)
doi:10.1038/375754a0
PMid:7596406

6. De Strooper B: Loss-of-function presenilin mutations in Alzheimer disease. Talking Point on the role of presenilin mutations in Alzheimer disease. EMBO Rep 8, 141-146 (2007)
doi:10.1038/sj.embor.7400897
PMid:17268505    PMCid:1796779

7. Hardy J, D. J. Selkoe: The amyloid hypothesis of Alzheimer's disease: progress and problems on the road to therapeutics. Science 297, 353-356 (2002)
doi:10.1126/science.1072994
PMid:12130773

8. Lambert J. C, D. Mann, F. Richard, J. Tian, J. Shi, U. Thaker, S. Merrot, J. Harris, B. Frigard, T. Iwatsubo, C. Lendon, P. Amouye: Is there a relation between APOE expression and brain amyloid load in Alzheimer's disease? J Neurol Neurosurg Psychiatry 76, 928-933 (2005)
doi:10.1136/jnnp.2004.048983

9. Kimberly W. T, M. J. LaVoie, B. L. Ostaszwski, W. Ye, M. S. Wolf, D.J. Selkoe: Gamma-secretase is a membrane protein complex composed of presenilin, nicastrin, aph-1, and pen-2. Proc. Natl. Acad. Sci USA 100: 6382-6387(2003)
doi:10.1073/pnas.1037392100

10. Wolfe M. S, W. Xia, B. L. Ostaszewski, T. S. Diehl, W. T. Kimberly, D. J. Selkoe: Two transmembrane aspartates in presenilin-1 required for presenilin endoproteolysis and gamma-secretase activity. Nature 398, 513-517 (1999)
doi:10.1038/19077
PMid:10206644

11. Tabaton M, E. Tamagno: The molecular link between beta- and gamma-secretase activity on the amyloid beta precursor protein. Cell Mol Life Sci 64, 2211-2218 (2007)
doi:10.1007/s00018-007-7219-3
PMid:17604999

12. Carrotta R, M. Manno, D. Bulone, V. Martorana, P. L. San Biagio: Protofibril formation of amyloid beta-protein at low pH via a non-cooperative elongation mechanism. J Biol Chem 280, 30001-30008 (2005)
doi:10.1074/jbc.M500052200
PMid:15985437

13. Eriksen J. L, S. A. Sagi, T. E. Smith, S. Weggen, P. Das, D. C. McLendon, V. V. Ozols, K. W. Jessing, K. H. Zavitz, E. H., Koo, T. E. Golde: NSAIDs and enantiomers of flurbiprofen target gamma-secretase and lower Abeta 42 in vivo. J Clin Invest 112, 440-449 (2003)
doi:10.1172/JCI200318162
PMid:12897211    PMCid:166298

14. Pastorcic M, H. K. Das: An upstream element containing an ETS binding site is crucial for transcription of the human presenilin-1 gene. J Biol Chem 274, 24297-24307 (1999)
doi:10.1074/jbc.274.34.24297
PMid:10446206

15. Pastorcic M, H. K. Das: Regulation of transcription of the human presenilin-1 gene by ets transcription factors and the p53 protooncogene. J Biol Chem 275, 34938-34945 (2000)
doi:10.1074/jbc.M005411200
PMid:10942770

16. Pastorcic M, H. K. Das: Ets transcription factors ER81 and Elk1 regulate the transcription of the human presenilin 1 gene promoter. Brain Res Mol Brain Res 113, 57-66 (2003)
doi:10.1016/S0169-328X(03)00090-1
PMid:12750007

17. Pastorcic M, H. K. Das: Alternative initiation of transcription of the human presenilin 1 gene in SH-SY5Y and SK-N-SH cells. The role of Ets factors in the regulation of presenilin 1. Eur J Biochem 271, 4485-4494 (2004)
doi:10.1111/j.1432-1033.2004.04453.x
PMid:15560789

18. Pastorcic M, H. K. Das: Analysis of transcriptional modulation of the presenilin 1 gene promoter by ZNF237, a candidate binding partner of the Ets transcription factor ERM. Brain Res 1128, 21-32 (2007)
doi:10.1016/j.brainres.2006.10.056
PMid:17126306    PMCid:1876729

19. Pastorcic M, H. K. Das: The C-terminal region of CHD3/ZFH interacts with the CIDD region of the Ets transcription factor ERM and represses transcription of the human presenilin 1 gene. FEBS J 274, 1434-1448 (2007)
doi:10.1111/j.1742-4658.2007.05684.x
PMid:17489097

20. Wei K, W. K. Miskimins, R. Miskimins: Stage-specific expression of myelin basic protein in oligodendrocytes involves Nkx2.2-mediated repression that is relieved by Sp1 transcription factor. J Biol Chem 280, 16284-16294 (2005)
doi:10.1074/jbc.M500491200
PMid:15695521

21. Komarov P. G, E. A. Komarova, R. V. Kondratov, K. Christov-Tselkov, J. S. Coon, M. V. Chernov, A. V. Gudkov: A chemical inhibitor of p53 that protects mice from the side effects of cancer therapy. Science 285, 1733-1737 (1999)
doi:10.1126/science.285.5434.1733
PMid:10481009

22. Allfrey V. G, R. Faulkner, A. E. Mirsky: Acetylation and Methylation of Histones and Their Possible Role in the Regulation of RNA Synthesis. Proc Natl Acad Sci USA 51, 786-794 (1964)
doi:10.1073/pnas.51.5.786

23. Shen C. H, B. P. Leblanc, C. Neal, R. Akhavan, D. J. Clark: Targeted histone acetylation at the yeast CUP1 promoter requires the transcriptional activator, the TATA boxes, and the putative histone acetylase encoded by SPT10. Mol Cell Biol 22, 6406-6416 (2002)
doi:10.1128/MCB.22.18.6406-6416.2002
PMid:12192040    PMCid:135642

24. Deplus R, C. Brenner, W. A. Burgers, P. Putmans, T. Kouzarides, Y. de Launoit, F. Fuks: Dnmt3L is a transcriptional repressor that recruits histone deacetylase. Nucleic Acids Res 30, 3831-3838 (2002)
doi:10.1093/nar/gkf509
PMid:12202768    PMCid:137431

25. Borchelt D.R, T. Ratovitski, J. van Lare, M. K. Lee, V. Gonzales, N. A. Jenkins, N. G. Copeland, D. L. Price, S. S. Sisodia: Accelerated amyloid deposition in the brains of transgenic mice coexpressing mutant presenilin 1 and amyloid precursor proteins. Neuron 19, 939-945(1997)
doi:10.1016/S0896-6273(00)80974-5
PMid:9354339

26. Borchelt D. R, G. Thinakaran, C. B. Eckman, M. K. Lee, F. Davenport, T. Ratovitsky, C. M. Prada, G. Kim, S. Seekins, D. Yager, H. H. Slunt, R. Wang, M. Seeger, M, A. I. Levey, S. E. Gandy, N. G. Copeland, N. A. Jenkins, D. L. Price, S. G. Younkin, S. S. Sisodia: Familial Alzheimer's disease-linked presenilin 1 variants elevate Abeta1-42/1-40 ratio in vitro and in vivo. Neuron 17, 1005-1013 (1996)
doi:10.1016/S0896-6273(00)80230-5
PMid:8938131

27. De Strooper B, P. Saftig, K. Craessaerts, H. Vanderstichele, G. Guhde, W. Annaert, K. Figura, F. Van Leuven: Deficiency of presenilin-1 inhibits the normal cleavage of amyloid precursor protein. Nature 391 387-390 (1998)
doi:10.1038/34910
PMid:9450754

28. Duff K, C. Eckman, C. Zehr, X. Yu, C. M. Prada, J. Perez-tur, M. Hutton, L. Buee, Y. Harigaya, D. Yager, D. Morgan, M. N. Gordon, L. Holcomb, L. Refolo, B. Zenk, J. Hardy, S. Younkin: Increased amyloid-beta42 (43) in brains of mice expressing mutant presenilin 1. Nature 383, 710-713 (1996)
doi:10.1038/383710a0
PMid:8878479

29. Herreman A, L. Serneels, W. Annaert, D. Collen, L. Schoonjans, B. De Strooper: Total inactivation of gamma-secretase activity in presenilin-deficient embryonic stem cells. Nat Cell Biol 2, 461-462 (2000)
doi:10.1038/35017105
PMid:10878813

30. Luo H. M, H. Deng, F. Xiao, Q. Gao, W. Weng, P. F. Zhang, X. G. Li: Down-regulation amyloid beta-protein 42 production by interfering with transcript of presenilin 1 gene with siRNA. Acta Pharmacol Sin 25, 1613-1618 (2004)

31. Mehta N. D, L. M. Refolo, C. Eckman, S. Sanders, D. Yager, J. Perez-Tur, S. Younkin, K. Duff, J. Hardy, M. Hutton: Increased Abeta42 (43) from cell lines expressing presenilin 1 mutations. Ann Neurol 43, 256-258 (1998)
doi:10.1002/ana.410430217
PMid:9485068

32. Scheuner D, C. Eckman, M. Jensen, X. Song, M. Citron, N. Suzuki, T. D. Bird, J. Hardy, M. Hutton, W. Kukull, E. Larson, E. Levy-Lahad, M. Viitanen, E. Peskind, P. Poorkaj, G. Schellenberg, R. Tanzi, W. Wasco, L. Lannfelt, D. Selkoe, S. Younkin: Secreted amyloid beta-protein similar to that in the senile plaques of Alzheimer's disease is increased in vivo by the presenilin 1 and 2 and APP mutations linked to familial Alzheimer's disease. Nat Med 2, 864-870 (1996)
doi:10.1038/nm0896-864
PMid:8705854

33. Steiner H, M. Kostka, H. Romig, G. Basset, B. Pesold, J. Hardy, A. Capell, L. Meyn, M. L. Grim, R. Baumeister, K. Fechteler, C. Haass: Glycine 384 is required for presenilin-1 function and is conserved in bacterial polytopic aspartyl proteases. Nat Cell Biol 2, 848-851 (2000)
doi:10.1038/35041097
PMid:11056541

34. Sohal J, A. Reiter, J. M. Goldman, N. C. Cross: Cloning of ZNF237, a novel member of the MYM gene family that maps to human chromosome 13q11-->q12. Cytogenet Cell Genet 89, 24-28 (2000)
doi:10.1159/000015584

35. Woodage T, M. A. Basrai, A. D. Baxevanis, P. Hieter, F. S. Collins: Characterization of the CHD family of proteins. Proc Natl Acad Sci USA 94, 11472-11477 (1997)
doi:10.1073/pnas.94.21.11472

36. Alves da Costa C, C. Sunyach, R. Pardossi-Piquard, J. Sevalle, B. Vincent, N. Boyer, T. Kawarai, N. Girardot, P. St George-Hyslop, F. Checler: Presenilin-dependent gamma-secretase-mediated control of p53-associated cell death in Alzheimer's disease. J Neurosci. 26, 6377-85 (2006)
doi:10.1523/JNEUROSCI.0651-06.2006
PMid:16763046

Abbreviations: AD: Alzheimer's disease, Aph-1: Anterior pharynx-1, APP: Amyloid precursor protein, AICD: APP intra-cellular domain, CHD3: Chromodomain helicase DNA binding protein 3, Ets: Avian erythroblastosis virus E26 oncogene homologue, FAD: Familial Alzheimer's disease or Early onset Alzheimer's disease, HDAC: Histone deacetylase, JNK: c-jun-NH2-terminal kinase, PCR: Polymerase chain reaction, Pen-2: Presenilin enhancer-2, NCT: Nicastrin, PS1: Presenilin-1, RT-PCR: Reverse transcription and polymerase chain reaction, TSA: trichostatin-A, ZNF237: Zinc finger protein 237

Key Words: Presenilin-1, Transcription, Gamma-Secretase, Abeta40

Send correspondence to: Hriday K. Das, Department of Pharmacology and Neuroscience, University of North Texas Health Science Center at Fort Worth, 3500 Camp Bowie Boulevard, Fort Worth, Texas 76107, Tel: 817-735-5448, Fax: 817-735-2091, E-mail:hdas@hsc.unt.edu